Home

SIENA 2D-DATABASE

Two-dimensional polyacrylamide gel electrophoresis database



Home 
Search by 


Maps 

Graphical Viewer



     Query Remote Interfaces:
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE

Exclude local DBs
has only effect if a remote
interface is selected
     

Protein list for HUMAN_DERMAL_FIBROBLASTS_CM 
culture medium  {Homo sapiens (Human)}
(map ID: siena2d:HUMAN_DERMAL_FIBROBLASTS_CM)
Release: 5 / 01 June 2000



Protein list for human_dermal_fibroblasts_cm   114 identified spots / 72 protein entries

Gene Name Description Accession n° Spot ID Exp pI Exp Mw Mapping Methods Comment Topics References
- Peptidyl-prolyl cis-trans isomerase A GI762938
(C-TERMINAL PROPEPTIDE DOMAIN)
2824
7.96
11'900
-
Comment, identification
1
Name=ACTB Actin, cytoplasmic 1 P02570
(ACTB_HUMAN)
1508
1500
1494
1493
1487
5.34
5.18
5.25
5.24
5.30
42'500
42'500
42'500
42'500
42'500
-
-
-
-
-
-
-
-
-
-
1
1
1
1
1
Name=AHSG Alpha-2-HS-glycoprotein [Precursor] P12763
(FETUA_BOVIN)
880
4.34
71'740
-
-
1
Name=ALB Serum albumin P02769
(ALBU)
918
910
900
887
5.90
5.84
5.78
5.70
70'000
70'000
70'000
70'000
-
-
-
-
Comment, identification
Comment, identification
Comment, identification
Comment, identification
1
1
1
1
Name=ALDOA Fructose-bisphosphate aldolase A P04075
(ALDOA_HUMAN)
1639
1635
8.03
8.17
38'100
38'100
-
-
-
-
1
1
Name=AP3S1 AP-3 complex subunit sigma-1 GI13635983
(AP3S1_HUMAN)
2722
6.68
14'150
-
Comment, identification
1
Name=APOA1 Apolipoprotein A-I [Precursor] P15497
(APOA1_BOVIN)
2240
5.20
26'000
-
Comment, identification
1
Name=ARHGDIA Rho GDP-dissociation inhibitor 1 P52565
(GDIR_HUMAN)
2197
5.30
26'750
-
Comment, identification
1
Name=ATP5B ATP synthase subunit beta, mitochondrial [Precursor] P06576
(ATPB_HUMAN)
1255
1199
5.08
5.00
50'600
50'600
-
-
-
-
1
1
Name=B2M Beta-2-microglobulin [Precursor] P01884
(B2MG_HUMAN)
2845
6.47
11'000
-
-
1
Name=CALR Calreticulin [Precursor] P27797
(CALR_HUMAN)
1128
1076
4.24
4.23
59'700
62'200
-
-
-
-
1
1
Name=CALU Calumenin [Precursor] O43852
(CALU_HUMAN)
1419
4.48
44'350
-
-
1
Name=CAPNS1 Calpain small subunit 1 P04632
(CPNS1_HUMAN)
2139
5.01
28'900
-
-
1
Name=CAPZA2 F-actin capping protein alpha-2 subunit P47755
(CAZA2_HUMAN)
1810
5.74
34'470
-
-
1
Name=CAPZB F-actin capping protein subunit beta P47756
(CAPZB_HUMAN)
2032
5.60
30'800
-
-
1
Name=CCT2 T-complex protein 1 subunit beta P78371
(TCPB_HUMAN)
1177
6.25
54'300
-
-
1
Name=CCT6A T-complex protein 1 subunit zeta P40227
(TCPZ_HUMAN)
1067
6.43
61'440
-
-
1
Name=CFL1 Cofilin-1 P23528
(COF1_HUMAN)
2547
2532
6.30
8.16
18'580
19'190
-
-
-
-
1
1
Name=CMPK UMP-CMP kinase P30085
(KCY_HUMAN)
2351
5.46
23'800
-
-
1
Name=COL1A1 Collagen alpha-1(I) chain [Precursor] P02452
(CO1A1_HUMAN)
195
5.52
195'630
-
-
1
Name=COL6A2 Collagen alpha-2(VI) chain [Precursor] P12110
(CO6A2_HUMAN)
295
6.83
176'610
-
-
1
Name=CTSB Cathepsin B [Precursor] P07858
(CATB_HUMAN)
2267
2213
5.24
5.24
24'570
25'900
-
-
Comment, identification
Comment, identification
1
1
Name=EEF1B2 Elongation factor 1-beta P24534
(EF1B_HUMAN)
1977
4.45
30'900
-
-
1
Name=ENO1 Alpha-enolase P06733
(ENOA_HUMAN)
1365
1362
1337
6.40
6.65
6.25
48'280
47'870
48'490
-
-
-
-
-
-
1
1
1
Name=ESD S-formylglutathione hydrolase P10768
(ESTD_HUMAN)
1973
6.74
31'730
-
-
1
Name=FHL2 Four and a half LIM domains protein 2 Q14192
(FHL2_HUMAN)
1955
7.50
31'730
-
-
1
Name=FN1 Fibronectin P02751
(FINC_HUMAN)
2571
5.17
17'080
-
Comment, identification
1
Name=GAPDH Glyceraldehyde-3-phosphate dehydrogenase P04406
(G3P_HUMAN)
1832
1826
1819
1805
1803
1789
1784
1745
7.85
8.15
7.80
7.90
8.40
8.45
8.50
7.78
35'500
35'500
35'500
34'470
35'500
35'500
35'500
35'060
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
1
1
1
1
1
1
1
1
Name=GSTP1 Glutathione S-transferase P P09211
(GSTP1_HUMAN)
2271
5.54
25'500
-
-
1
Name=HEBP2 Heme-binding protein 2 Q9Y5Z4
(HEBP2_HUMAN)
2170
4.39
27'520
-
Comment, identification
1
Name=HSPA5 78 kDa glucose-regulated protein [Precursor] P11021
(GRP78_HUMAN)
819
818
5.01
4.99
76'500
76'500
-
-
-
-
1
1
Name=HSPB1 Heat-shock protein beta-1 P04792
(HSPB1_HUMAN)
2166
2159
6.06
5.58
28'600
28'520
-
-
Comment, identification
Comment, identification
1
1
Name=LASP1 LIM and SH3 domain protein 1 Q14847
(LASP1_HUMAN)
1800
6.25
35'060
-
-
1
Name=LGALS1 Galectin-1 P09382
(LEG1_HUMAN)
2742
2730
5.07
4.84
12'700
12'900
-
-
-
-
1
1
Name=LGALS3 Galectin-3 P17931
(LEG3_HUMAN)
2087
2061
8.26
8.47
30'000
30'050
-
-
-
-
1
1
Name=LMNA Lamin-A/C P02545
(LMNA_HUMAN)
967
959
6.74
6.58
63'900
63'900
-
-
-
-
1
1
Name=MYL6 Myosin light polypeptide 6 P24572
(MYL6_HUMAN)
2632
2611
4.41
4.19
15'150
16'420
-
-
Comment, identification
Comment, identification
1
1
Name=NDRG1 Protein NDRG1 Q92597
(NDRG1_HUMAN)
1417
5.57
42'370
-
-
1
Name=NME2P1 Putative nucleoside diphosphate kinase O60361
(NDK8_HUMAN)
2549
2533
8.78
8.64
19'310
19'310
-
-
Comment, identification
Comment, identification
1
1
Name=PARK7 Protein DJ-1 O14805
(PARK7_HUMAN)
2327
6.20
24'270
-
Comment, identification
1
Name=PDIA3 Protein disulfide-isomerase A3 [Precursor] P30101
(PDIA3_HUMAN)
1164
1161
1137
5.63
5.75
5.64
56'010
56'200
56'000
-
-
-
-
-
-
1
1
1
Name=PDIA6 Protein disulfide-isomerase A6 [Precursor] Q15084
(PDIA6_HUMAN)
1229
5.01
50'600
-
-
1
Name=PDLIM1 PDZ and LIM domain protein 1 O00151
(PDLI1_HUMAN)
1794
6.68
35'800
-
-
1
Name=PEBP1 Phosphatidylethanolamine-binding protein 1 P30086
(PEBP1_HUMAN)
2409
7.62
23'600
-
-
1
Name=PGAM1 Phosphoglycerate mutase 1 P18669
(PGAM1_HUMAN)
2106
6.89
29'700
-
-
1
Name=PGK1 Phosphoglycerate kinase 1 P00558
(PGK1_HUMAN)
1439
1430
7.99
8.22
43'080
43'250
-
-
-
-
1
1
Name=PHGDH D-3-phosphoglycerate dehydrogenase O43175
(SERA_HUMAN)
1144
6.51
56'000
-
-
1
Name=PKM2 Pyruvate kinase isozymes M1/M2 P14618
(KPYM_HUMAN)
1028
1019
7.78
7.75
61'700
61'700
-
-
-
-
1
1
Name=PNPO Pyridoxine-5'-phosphate oxidase Q9NVS9
(PNPO_HUMAN)
2126
6.16
29'400
-
-
1
Name=PPIA Peptidyl-prolyl cis-trans isomerase A P05092
(PPIA_HUMAN)
2607
2595
2594
6.47
7.74
7.56
17'300
17'700
17'600
-
-
-
-
-
-
1
1
1
Name=PRDX1 Peroxiredoxin-1 Q06830
(PRDX1_HUMAN)
2294
8.20
26'170
-
-
1
Name=PRDX6 Peroxiredoxin-6 P30041
(PRDX6_HUMAN)
2150
6.35
28'520
-
-
1
Name=PSMA3 Proteasome subunit alpha type 3 P25788
(PSA3_HUMAN)
2082
5.15
29'950
-
-
2
Name=PSMA5 Proteasome subunit alpha type 5 P28066
(PSA5_HUMAN)
2125
4.65
28'990
-
-
1
Name=PSME1 Proteasome activator complex subunit 1 Q06323
(PSME1_HUMAN)
2073
5.74
30'050
-
-
1
Name=RANBP1 Ran-specific GTPase-activating protein P43487
(RANG_HUMAN)
2009
5.15
31'050
-
-
1
Name=S100A13 Protein S100-A13 Q99584
(S10AD_HUMAN)
2832
5.70
11'140
-
Comment, identification
1
Name=SEPT11 Septin-11 Q9NVA2
(SEP11_HUMAN)
1319
1309
6.81
6.16
51'200
50'600
-
-
Comment, identification
Comment, identification
1
1
Name=SERPINE1 Plasminogen activator inhibitor 1 [Precursor] P05121
(PAI1_HUMAN)
1429
6.96
44'350
-
-
1
Name=SERPINH1 Serpin H1 P29043
(HS47)
1376
8.84
51'800
-
Comment, identification
1
Name=SOD1 Superoxide dismutase [Cu-Zn] P00441
(SODC_HUMAN)
2529
5.80
19'300
-
-
1
Name=SOD2 Superoxide dismutase [Mn], mitochondrial [Precursor] P04179
(SODM_HUMAN)
2342
2339
6.90
7.21
25'000
24'940
-
-
-
-
1
1
Name=TAGLN Transgelin Q01995
(TAGL_HUMAN)
2292
2290
8.78
8.97
26'760
27'060
-
-
Comment, identification
Comment, identification
1
1
Name=TF Serotransferrin [Precursor] Q29443
(TRFE_BOVIN)
806
805
804
803
796
6.60
6.42
6.34
6.30
6.39
75'000
75'000
75'000
75'000
75'000
-
-
-
-
-
-
-
-
-
-
1
1
1
1
1
Name=TPI1 Triosephosphate isomerase P00938
(TPIS_HUMAN)
2168
2154
6.50
6.96
28'600
28'600
-
-
-
-
1
1
Name=TPM2 Tropomyosin beta chain P06468
(TPM2_HUMAN)
1683
4.77
35'200
-
-
1
Name=TPM4 Tropomyosin alpha-4 chain P07226
(TPM4_HUMAN)
1916
4.74
31'390
-
-
3
Name=TPT1 Translationally-controlled tumor protein P13693
(TCTP_HUMAN)
2340
4.81
23'100
-
-
1
Name=TUBB2A Tubulin beta-2 chain P07437
(TBB2_HUMAN)
1261
5.00
50'600
-
-
1
Name=UCHL1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 P09936
(UCHL1_HUMAN)
2187
5.42
28'080
-
Comment, identification
1
Name=VCL Vinculin P18206
(VINC_HUMAN)
520
6.04
125'930
-
-
1
Name=VIM Vimentin P08670
(VIME_HUMAN)
1175
5.12
54'500
-
-
1



Cited references

# PubMed/Medline Authors Location
[1] 12707924 Boraldi F., Bini L., Liberatori S., Armini A., Pallini V., Tiozzo R., Pasquali Ronchetti I., Quaglino D.; Electrophoresis 24:1292-1310(2003).
[2] 2707924 Boraldi F., Bini L., Liberatori S., Armini A., Pallini V., Tiozzo R., Pasquali Ronchetti I., Quaglino D.; Electrophoresis 24:1292-1310(2003).
[3] 12707924 Boraldi F., Bini L., Liberatori S., Armini A., Pallini V., Tiozzo R., Pasquali Ronchetti I., Quaglino D.; Electrophoresis 24:1292-1310(2003).


Gel experimental information

Information Type Data
Map name HUMAN_DERMAL_FIBROBLASTS_CM {culture medium}
Dimension 2-D
species Homo sapiens (Human) / TaxID:9606
Number of identified spots 114
Number of identified proteins 72
Graphical interface
[Click for graphical interface]


SIENA 2D-DATABASE image


Gateways to other related servers


This database was constructed and maintained by Luca Bini, using the Make2D-DB II package (ver. 2.50.1) from the WORLD-2DPAGE of the ExPASy web server

[Home]